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Rps29-ps16 ribosomal protein S29, pseudogene 16 [ Rattus norvegicus (Norway rat) ]

Gene ID: 108352650, updated on 29-Feb-2024

Summary

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Official Symbol
Rps29-ps16provided by RGD
Official Full Name
ribosomal protein S29, pseudogene 16provided by RGD
Primary source
RGD:11376557
See related
Ensembl:ENSRNOG00000028939 AllianceGenome:RGD:11376557
Gene type
pseudo
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable zinc ion binding activity. Predicted to be involved in cytoplasmic translation. Predicted to be located in polysomal ribosome. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 13. Orthologous to human RPS29 (ribosomal protein S29). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See Rps29-ps16 in Genome Data Viewer
Location:
13q24
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (87816958..87817269)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (85284638..85284949)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (91333998..91334323)

Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene C-reactive protein Neighboring gene 60S ribosomal protein L6 pseudogene Neighboring gene olfactory receptor family 10 subfamily AS member 1, pseudogene 1 Neighboring gene amyloid P component, serum

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Other Names

  • 40S ribosomal protein S29

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_149688.1 

    Range
    101..412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086031.1 Reference GRCr8

    Range
    87816958..87817269
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.