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DERA deoxyribose-phosphate aldolase [ Capra hircus (goat) ]

Gene ID: 108636036, updated on 14-Mar-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
EnsemblRapid:ENSCHIG00000027109
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 5 NC_030812.1 (92481907..92599982, complement)

Chromosome 5 - NC_030812.1Genomic Context describing neighboring genes Neighboring gene microsomal glutathione S-transferase 1 Neighboring gene solute carrier family 15 member 5 Neighboring gene 40S ribosomal protein S3a-like Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene EGFR pathway substrate 8, signaling adaptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030812.1 Chromosome 5 Reference ASM170441v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of Liaoning cashmere goat transcriptome: sequencing, de novo assembly, functional annotation and comparative analysis. Liu H, et al. PLoS One, 2013. PMID 24130835, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030812.1 Reference ASM170441v1 Primary Assembly

    Range
    92481907..92599982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018048429.1 → XP_017903918.1  deoxyribose-phosphate aldolase isoform X1

    UniProtKB/TrEMBL
    A0A452GAG6, A0A452GB39
    Related
    ENSCHIP00000033622.1, ENSCHIT00000041501.2
    Conserved Domains (1) summary
    cd00959
    Location:83 → 310
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  2. XM_018048430.1 → XP_017903919.1  deoxyribose-phosphate aldolase isoform X2

    UniProtKB/TrEMBL
    A0A452GAR6
    Related
    ENSCHIP00000033623.2, ENSCHIT00000041502.2
Nucleotide Protein
Heading Accession and Version

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