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LOC108697493 paired box protein Pax-2-B-like [ Xenopus laevis (African clawed frog) ]

Gene ID: 108697493, updated on 16-Oct-2021

Summary

Gene symbol
LOC108697493
Gene description
paired box protein Pax-2-B-like
Locus tag
XELAEV_18037123mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
Pax-2; Pax-2b; pax2-b; xPax-2b
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Genomic context

See LOC108697493 in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (32158067..32227232)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (30649619..30719347)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene hypoxia inducible factor 1 subunit alpha inhibitor S homeolog Neighboring gene uncharacterized LOC108697492 Neighboring gene CUE domain containing 2 S homeolog Neighboring gene uncharacterized LOC121396137

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    32158067..32227232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041571100.1XP_041427034.1  paired box protein Pax-2-B isoform X9

    Conserved Domains (1) summary
    smart00351
    Location:16140
    PAX; Paired Box domain
  2. XM_018227580.2XP_018083069.1  paired box protein Pax-2-B isoform X2

  3. XM_018227579.2XP_018083068.1  paired box protein Pax-2-B isoform X1

  4. XM_018227582.2XP_018083071.1  paired box protein Pax-2-B isoform X5

  5. XM_018227584.2XP_018083073.1  paired box protein Pax-2-B isoform X7

  6. XM_018227586.2XP_018083075.1  paired box protein Pax-2-B isoform X10

  7. XM_041571099.1XP_041427033.1  paired box protein Pax-2-B isoform X4

    Conserved Domains (2) summary
    smart00351
    Location:15139
    PAX; Paired Box domain
    pfam12403
    Location:348492
    Pax2_C; Paired-box protein 2 C terminal
  8. XM_018227589.2XP_018083078.1  paired box protein Pax-2-B isoform X12

  9. XM_018227581.2XP_018083070.1  paired box protein Pax-2-B isoform X3

    UniProtKB/TrEMBL
    A0A1L8FF43
  10. XM_018227583.2XP_018083072.1  paired box protein Pax-2-B isoform X6

    UniProtKB/Swiss-Prot
    O57682
  11. XM_018227585.2XP_018083074.1  paired box protein Pax-2-B isoform X8

  12. XM_018227588.2XP_018083077.1  paired box protein Pax-2-B isoform X11

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