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LOC109339146 hydroxymethylglutaryl-CoA lyase, mitochondrial-like [ Lupinus angustifolius (narrow-leaved blue lupine) ]

Gene ID: 109339146, updated on 11-Apr-2024

Summary

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Gene symbol
LOC109339146
Gene description
hydroxymethylglutaryl-CoA lyase, mitochondrial-like
Locus tag
TanjilG_26747
Gene type
protein coding
RefSeq status
MODEL
Organism
Lupinus angustifolius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Genomic context

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See LOC109339146 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current LupAngTanjil_v1.0 (GCF_001865875.1) Unplaced Scaffold NW_017722860.1 (5749..14187, complement)

NW_017722860.1Genomic Context describing neighboring genes Neighboring gene lysine histidine transporter-like 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017722860.1 Unplaced Scaffold Reference LupAngTanjil_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Kamphuis LG, et al. Plant Biotechnol J, 2015 Jan. PMID 25060816, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydroxymethylglutaryl-CoA lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-leucine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ketone body biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxymethylglutaryl-CoA lyase, mitochondrial-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LupAngTanjil_v1.0

Genomic

  1. NW_017722860.1 Reference LupAngTanjil_v1.0

    Range
    5749..14187 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019576550.1 → XP_019432095.1  hydroxymethylglutaryl-CoA lyase, mitochondrial-like

    UniProtKB/TrEMBL
    A0A394DD78

  2. XM_019576547.1 → XP_019432092.1  hydroxymethylglutaryl-CoA lyase, mitochondrial-like

    UniProtKB/TrEMBL
    A0A394DD78

  3. XM_019576548.1 → XP_019432093.1  hydroxymethylglutaryl-CoA lyase, mitochondrial-like

    UniProtKB/TrEMBL
    A0A394DD78

  4. XM_019576546.1 → XP_019432091.1  hydroxymethylglutaryl-CoA lyase, mitochondrial-like

    UniProtKB/TrEMBL
    A0A394DD78

  5. XM_019576549.1 → XP_019432094.1  hydroxymethylglutaryl-CoA lyase, mitochondrial-like

    UniProtKB/TrEMBL
    A0A394DD78
Nucleotide Protein
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