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GPNMB glycoprotein nmb [ Bos indicus (zebu cattle) ]

Gene ID: 109557304, updated on 14-Mar-2024

Summary

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Gene symbol
GPNMB
Gene description
glycoprotein nmb
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See GPNMB in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 4 NC_032653.1 (33160293..33186536)

Chromosome 4 - NC_032653.1Genomic Context describing neighboring genes Neighboring gene nucleoporin 42 Neighboring gene uncharacterized LOC109558080 Neighboring gene uncharacterized LOC109557305 Neighboring gene uncharacterized LOC109557306

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032653.1 Chromosome 4 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A preliminary sketch of horn cancer transcriptome in Indian zebu cattle. Tripathi AK, et al. Gene, 2012 Feb 1. PMID 22134011

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane glycoprotein NMB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032653.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    33160293..33186536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019958542.1 → XP_019814101.1  transmembrane glycoprotein NMB

    UniProtKB/TrEMBL
    A0A6P5BB26
    Conserved Domains (1) summary
    cd00146
    Location:253 → 316
    PKD; polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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