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Tpcn1 two pore segment channel 1 [ Castor canadensis (American beaver) ]

Gene ID: 109681964, updated on 15-Apr-2019

Summary

Gene symbol
Tpcn1
Gene description
two pore segment channel 1
See related
Ensembl:ENSCCNG00000009713
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
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Genomic context

See Tpcn1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017869938.1 (92585..145418, complement)

NW_017869938.1Genomic Context describing neighboring genes Neighboring gene phospholipase B domain containing 2 Neighboring gene solute carrier family 8 member B1 Neighboring gene IQ motif containing D Neighboring gene RBPJ interacting and tubulin associated 1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_017869938.1 Unplaced Scaffold Reference C.can genome v1.0

General protein information

Preferred Names
two pore calcium channel protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017869938.1 Reference C.can genome v1.0

    Range
    92585..145418 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020156931.1XP_020012520.1  two pore calcium channel protein 1 isoform X2

    Conserved Domains (2) summary
    pfam00520
    Location:4182
    Ion_trans; Ion transport protein
    pfam12325
    Location:561631
    TMF_TATA_bd; TATA element modulatory factor 1 TATA binding
  2. XM_020156930.1XP_020012519.1  two pore calcium channel protein 1 isoform X1

    Related
    ENSCCNP00000009182.1, ENSCCNT00000012101.1
    Conserved Domains (2) summary
    pfam00520
    Location:143331
    Ion_trans; Ion transport protein
    pfam12325
    Location:710780
    TMF_TATA_bd; TATA element modulatory factor 1 TATA binding
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