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Ap1m2 adaptor related protein complex 1 subunit mu 2 [ Castor canadensis (American beaver) ]

Gene ID: 109689051, updated on 14-Mar-2024

Summary

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Gene symbol
Ap1m2
Gene description
adaptor related protein complex 1 subunit mu 2
See related
Ensembl:ENSCCNG00000014123
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Ap1m2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870827.1 (133051..151497, complement)

NW_017870827.1Genomic Context describing neighboring genes Neighboring gene KRI1 homolog Neighboring gene cyclin dependent kinase inhibitor 2D Neighboring gene solute carrier family 44 member 2 (CTL2 blood group) Neighboring gene interleukin enhancer binding factor 3 Neighboring gene queuine tRNA-ribosyltransferase catalytic subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870827.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of clathrin adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in clathrin-coated vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-1 complex subunit mu-2
Names
adaptor related protein complex 1 mu 2 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870827.1 Reference C.can genome v1.0

    Range
    133051..151497 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020167739.1 → XP_020023328.1  AP-1 complex subunit mu-2 isoform X3

    UniProtKB/TrEMBL
    A0A250YHR7, A0A8B7UUY4
    Conserved Domains (1) summary
    cl10970
    Location:128 → 397
    AP_MHD_Cterm; C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)

  2. XM_020167738.1 → XP_020023327.1  AP-1 complex subunit mu-2 isoform X2

    UniProtKB/TrEMBL
    A0A250YHR7, A0A8B7UW16
    Related
    ENSCCNP00000013631.1, ENSCCNT00000017886.1
    Conserved Domains (1) summary
    cl10970
    Location:154 → 421
    AP_MHD_Cterm; C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)

  3. XM_020167736.1 → XP_020023325.1  AP-1 complex subunit mu-2 isoform X1

    UniProtKB/TrEMBL
    A0A250YHR7, A0A8B7UY58
    Conserved Domains (1) summary
    cl10970
    Location:154 → 423
    AP_MHD_Cterm; C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)
Nucleotide Protein
Heading Accession and Version

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