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Clu clusterin [ Castor canadensis (American beaver) ]

Gene ID: 109692536, updated on 14-Mar-2024

Summary

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Gene symbol
Clu
Gene description
clusterin
See related
Ensembl:ENSCCNG00000009113
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Clu in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871251.1 (539780..553026)

NW_017871251.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 25 Neighboring gene serine/arginine-rich splicing factor 5 pseudogene Neighboring gene scavenger receptor class A member 3 Neighboring gene L-gulonolactone oxidase-like Neighboring gene ADAM metallopeptidase domain 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871251.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
clusterin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871251.1 Reference C.can genome v1.0

    Range
    539780..553026
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020173194.1 → XP_020028783.1  clusterin

    UniProtKB/TrEMBL
    A0A250YI57, A0A8C0WCK1
    Related
    ENSCCNP00000008627.1, ENSCCNT00000011367.1
    Conserved Domains (1) summary
    pfam01093
    Location:29 → 443
    Clusterin

  2. XM_020173195.1 → XP_020028784.1  clusterin

    UniProtKB/TrEMBL
    A0A250YI57, A0A8C0WCK1
    Conserved Domains (1) summary
    pfam01093
    Location:29 → 443
    Clusterin

  3. XM_020173196.1 → XP_020028785.1  clusterin

    UniProtKB/TrEMBL
    A0A250YI57, A0A8C0WCK1
    Conserved Domains (1) summary
    pfam01093
    Location:29 → 443
    Clusterin
Nucleotide Protein
Heading Accession and Version

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