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Nubp1 NUBP iron-sulfur cluster assembly factor 1, cytosolic [ Castor canadensis (American beaver) ]

Gene ID: 109696700, updated on 14-Mar-2024

Summary

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Gene symbol
Nubp1
Gene description
NUBP iron-sulfur cluster assembly factor 1, cytosolic
See related
Ensembl:ENSCCNG00000029128
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871885.1 (137832..153123, complement)

NW_017871885.1Genomic Context describing neighboring genes Neighboring gene Dexi homolog Neighboring gene class II major histocompatibility complex transactivator Neighboring gene trans-golgi network vesicle protein 23 homolog A Neighboring gene tektin-5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871885.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent FeS chaperone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in iron-sulfur cluster assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic Fe-S cluster assembly factor NUBP1
Names
nucleotide binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871885.1 Reference C.can genome v1.0

    Range
    137832..153123 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020179850.1 → XP_020035439.1  cytosolic Fe-S cluster assembly factor NUBP1 isoform X2

    UniProtKB/TrEMBL
    A0A250YFP3, A0A8B7VVU1
    Conserved Domains (1) summary
    pfam10609
    Location:92 → 312
    ParA; NUBPL iron-transfer P-loop NTPase

  2. XM_020179849.1 → XP_020035438.1  cytosolic Fe-S cluster assembly factor NUBP1 isoform X1

    UniProtKB/TrEMBL
    A0A250YFP3, A0A8B7VUY9
    Related
    ENSCCNP00000030435.1, ENSCCNT00000038346.1
    Conserved Domains (1) summary
    pfam10609
    Location:92 → 342
    ParA; NUBPL iron-transfer P-loop NTPase
Nucleotide Protein
Heading Accession and Version

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