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Ccn1 cellular communication network factor 1 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110291274, updated on 15-Mar-2024

Summary

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Gene symbol
Ccn1
Gene description
cellular communication network factor 1
See related
Ensembl:MGP_CAROLIEiJ_G0025714
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Cyr61
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 3 NC_034572.1 (138851676..138854698, complement)

Chromosome 3 - NC_034572.1Genomic Context describing neighboring genes Neighboring gene collagen type XXIV alpha 1 chain Neighboring gene 40S ribosomal protein S8 pseudogene Neighboring gene zinc finger HIT-type containing 6 Neighboring gene dimethylarginine dimethylaminohydrolase 1 Neighboring gene BCL10 immune signaling adaptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034572.1 Chromosome 3 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CCN1 promotes IL-1β production in keratinocytes by activating p38 MAPK signaling in psoriasis. Sun Y, et al. Sci Rep, 2017 Mar 7. PMID 28266627, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCN family member 1
Names
cysteine rich angiogenic inducer 61

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034572.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    138851676..138854698 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021158317.1 → XP_021013976.1  CCN family member 1

    UniProtKB/TrEMBL
    A0A6P5PGD9
    Related
    MGP_CAROLIEiJ_P0060905, MGP_CAROLIEiJ_T0060905.1
    Conserved Domains (4) summary
    smart00209
    Location:230 → 270
    TSP1; Thrombospondin type 1 repeats
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00007
    Location:291 → 373
    Cys_knot; Cystine-knot domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
Nucleotide Protein
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