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fanca FA complementation group A [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 111612345, updated on 15-Mar-2024

Summary

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Gene symbol
fanca
Gene description
FA complementation group A
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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See fanca in Genome Data Viewer
Location:
chromosome: 2
Exon count:
41
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 2 NC_036444.1 (41734..74548)

Chromosome 2 - NC_036444.1Genomic Context describing neighboring genes Neighboring gene charged multivesicular body protein 1A Neighboring gene solute carrier family 10 member 3 Neighboring gene zinc finger protein 276 Neighboring gene VPS9 domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036444.1 Chromosome 2 Reference X_maculatus-5.0-male Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Fanconi anaemia nuclear complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia group A protein
Names
Fanconi anemia complementation group A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036444.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    41734..74548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023353483.1 → XP_023209251.1  Fanconi anemia group A protein isoform X8

    Conserved Domains (1) summary
    pfam15865
    Location:171 → 494
    Fanconi_A_N; Fanconi anaemia group A protein N terminus

  2. XM_023353479.1 → XP_023209247.1  Fanconi anemia group A protein isoform X7

    Conserved Domains (1) summary
    pfam15865
    Location:171 → 494
    Fanconi_A_N; Fanconi anaemia group A protein N terminus

  3. XM_023353452.1 → XP_023209220.1  Fanconi anemia group A protein isoform X3

    Conserved Domains (1) summary
    pfam15865
    Location:171 → 494
    Fanconi_A_N; Fanconi anaemia group A protein N terminus

  4. XM_023353440.1 → XP_023209208.1  Fanconi anemia group A protein isoform X1

    Conserved Domains (1) summary
    pfam15865
    Location:171 → 494
    Fanconi_A_N; Fanconi anaemia group A protein N terminus

  5. XM_023353468.1 → XP_023209236.1  Fanconi anemia group A protein isoform X5

    Conserved Domains (1) summary
    pfam15865
    Location:171 → 494
    Fanconi_A_N; Fanconi anaemia group A protein N terminus

  6. XM_023353473.1 → XP_023209241.1  Fanconi anemia group A protein isoform X6

    Conserved Domains (1) summary
    pfam15865
    Location:171 → 494
    Fanconi_A_N; Fanconi anaemia group A protein N terminus

  7. XM_023353448.1 → XP_023209216.1  Fanconi anemia group A protein isoform X2

    Conserved Domains (1) summary
    pfam15865
    Location:170 → 493
    Fanconi_A_N; Fanconi anaemia group A protein N terminus

  8. XM_023353460.1 → XP_023209228.1  Fanconi anemia group A protein isoform X4

    Conserved Domains (1) summary
    pfam15865
    Location:160 → 483
    Fanconi_A_N; Fanconi anaemia group A protein N terminus

  9. XM_023353485.1 → XP_023209253.1  Fanconi anemia group A protein isoform X9

    Conserved Domains (1) summary
    pfam15865
    Location:12 → 234
    Fanconi_A_N; Fanconi anaemia group A protein N terminus
Nucleotide Protein Strain
Heading Accession and Version

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