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POLR2J RNA polymerase II subunit J [ Alligator sinensis (Chinese alligator) ]

Gene ID: 112551830, updated on 15-Mar-2024

Summary

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Gene symbol
POLR2J
Gene description
RNA polymerase II subunit J
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842613.1 (73090..76619, complement)

NW_005842613.1Genomic Context describing neighboring genes Neighboring gene ORAI calcium release-activated calcium modulator 2 Neighboring gene alkB homolog 4, lysine demethylase Neighboring gene leucine rich repeats and WD repeat domain containing 1 Neighboring gene ras GTPase-activating protein 4 Neighboring gene uncharacterized LOC102378890

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842613 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase II subunit RPB11-a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842613.1 Reference ASM45574v1 Primary Assembly

    Range
    73090..76619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025214973.1 → XP_025070758.1  DNA-directed RNA polymerase II subunit RPB11-a

    UniProtKB/TrEMBL
    A0A3Q0HJX7
    Conserved Domains (1) summary
    cd06926
    Location:46 → 102
    RNAP_II_RPB11; RPB11 subunit of Eukaryotic RNA polymerase II
Nucleotide Protein
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