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LOC113743974 Sharpr-MPRA regulatory region 5898 [ Homo sapiens (human) ]

Gene ID: 113743974, discontinued on 15-Jun-2023

Summary

Gene symbol
LOC113743974
Gene description
Sharpr-MPRA regulatory region 5898
Gene type
biological region
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This genomic sequence was predicted to be a transcriptional regulatory region based on chromatin state analysis from the ENCODE (ENCyclopedia Of DNA Elements) project. It was validated as a functional enhancer by the Sharpr-MPRA technique (Systematic high-resolution activation and repression profiling with reporter tiling using massively parallel reporter assays) in both HepG2 liver carcinoma cells (group: HepG2 Activating non-DNase unmatched - State 4:PromP, inactive/poised promoter, highly conserved) and K562 erythroleukemia cells (group: K562 Activating DNase unmatched - State 4:PromP). [provided by RefSeq, Dec 2018]
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Genomic context

See LOC113743974 in Genome Data Viewer
Location:
7p
Annotation release Status Assembly Chr Location
RS_2023_03 latest, but not current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (2844395..2844689)
RS_2023_03 latest, but not current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (2957969..2958263)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (2884029..2884323)