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Csprs component of Sp100-rs [ Mus musculus (house mouse) ]

Gene ID: 114564, updated on 6-May-2021

Summary

Official Symbol
Csprsprovided by MGI
Official Full Name
component of Sp100-rsprovided by MGI
Primary source
MGI:MGI:1891441
See related
Ensembl:ENSMUSG00000062783
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
HSR; D1Lub; D1Lub1
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Genomic context

See Csprs in Genome Data Viewer
Location:
8 B1.3; 1
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 1 Unlocalized Scaffold NT_162750.1 (111558..163011, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 Unlocalized Scaffold NT_162750.1 (111558..163011, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 Unlocalized Scaffold NT_162750.1 (111572..163011, complement)

NT_162750.1Genomic Context describing neighboring genes Neighboring gene nuclear body protein SP140-like protein Neighboring gene uncharacterized LOC108168674 Neighboring gene sp110 nuclear body protein-like Neighboring gene uncharacterized LOC105242429 Neighboring gene uncharacterized LOC102633472 Neighboring gene uncharacterized LOC108168673 Neighboring gene uncharacterized LOC115489309 Neighboring gene component of Sp100-rs-like

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • MGC29132

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_033616.4NP_291094.2  component of Sp100-rs

    See identical proteins and their annotated locations for NP_291094.2

    Status: VALIDATED

    Source sequence(s)
    AC132444
    UniProtKB/TrEMBL
    Q8BYZ8
    Related
    ENSMUSP00000091219.2, ENSMUST00000078827.3
    Conserved Domains (1) summary
    pfam00001
    Location:106273
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NT_162750.1 Reference GRCm39 C57BL/6J

    Range
    111558..163011 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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