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PLEKHG6 pleckstrin homology and RhoGEF domain containing G6 [ Rhinatrema bivittatum (two-lined caecilian) ]

Gene ID: 115078140, updated on 17-Mar-2024

Summary

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Gene symbol
PLEKHG6
Gene description
pleckstrin homology and RhoGEF domain containing G6
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinatrema bivittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Rhinatrematidae; Rhinatrema
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
17
Annotation release Status Assembly Chr Location
100 current aRhiBiv1.1 (GCF_901001135.1) 16 NC_042630.1 (173606..228096, complement)

Chromosome 16 - NC_042630.1Genomic Context describing neighboring genes Neighboring gene sodium channel epithelial 1 subunit alpha Neighboring gene TNF receptor superfamily member 1A Neighboring gene tumor necrosis factor receptor superfamily member 3-like Neighboring gene CD27 antigen-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042630.1 Chromosome 16 Reference aRhiBiv1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pleckstrin homology domain-containing family G member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinatrema bivittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRhiBiv1.1 Primary Assembly

Genomic

  1. NC_042630.1 Reference aRhiBiv1.1 Primary Assembly

    Range
    173606..228096 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029580822.1 → XP_029436682.1  pleckstrin homology domain-containing family G member 6

    Conserved Domains (2) summary
    cd13244
    Location:445 → 541
    PH_PLEKHG5_G6; Pleckstrin homology domain-containing family G member 5 and 6 pleckstrin homology (PH) domain
    pfam00621
    Location:202 → 388
    RhoGEF; RhoGEF domain
Nucleotide Protein
Heading Accession and Version

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