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SWI5 SWI5 homologous recombination repair protein [ Rhinatrema bivittatum (two-lined caecilian) ]

Gene ID: 115097683, updated on 17-Mar-2024

Summary

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Gene symbol
SWI5
Gene description
SWI5 homologous recombination repair protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinatrema bivittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Rhinatrematidae; Rhinatrema
Orthologs
human mouse all
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Genomic context

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See SWI5 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
100 current aRhiBiv1.1 (GCF_901001135.1) 8 NC_042622.1 (77859434..77870553, complement)

Chromosome 8 - NC_042622.1Genomic Context describing neighboring genes Neighboring gene ubiquitin related modifier 1 Neighboring gene solute carrier family 27 member 4 Neighboring gene golgin A2 Neighboring gene uncharacterized LOC115097234 Neighboring gene dynamin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042622.1 Chromosome 8 Reference aRhiBiv1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Swi5-Sfr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Swi5-Swi2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA repair protein SWI5 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinatrema bivittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRhiBiv1.1 Primary Assembly

Genomic

  1. NC_042622.1 Reference aRhiBiv1.1 Primary Assembly

    Range
    77859434..77870553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029613630.1 → XP_029469490.1  DNA repair protein SWI5 homolog isoform X2

  2. XM_029613629.1 → XP_029469489.1  DNA repair protein SWI5 homolog isoform X1

    Conserved Domains (1) summary
    pfam07061
    Location:29 → 102
    Swi5

RNA

  1. XR_003858316.1 RNA Sequence

  2. XR_003858315.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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