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fbxo16 F-box protein 16 [ Gadus morhua (Atlantic cod) ]

Gene ID: 115533929, updated on 17-Mar-2024

Summary

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Gene symbol
fbxo16
Gene description
F-box protein 16
Gene type
protein coding
RefSeq status
MODEL
Organism
Gadus morhua
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 21
Exon count:
9
Annotation release Status Assembly Chr Location
100 current gadMor3.0 (GCF_902167405.1) 21 NC_044068.1 (11076689..11082090, complement)

Chromosome 21 - NC_044068.1Genomic Context describing neighboring genes Neighboring gene protein FAM177A1-like Neighboring gene fibronectin leucine rich transmembrane protein 2 Neighboring gene CDC42 binding protein kinase alpha (DMPK-like) b Neighboring gene frizzled class receptor 3a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044068.1 Chromosome 21 Reference gadMor3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Atlantic cod reveals a unique immune system. Star B, et al. Nature, 2011 Aug 10. PMID 21832995, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box only protein 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gadMor3.0 Primary Assembly

Genomic

  1. NC_044068.1 Reference gadMor3.0 Primary Assembly

    Range
    11076689..11082090 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030344443.1 → XP_030200303.1  F-box only protein 16 isoform X5

    Conserved Domains (1) summary
    pfam12937
    Location:86 → 123
    F-box-like

  2. XM_030344439.1 → XP_030200299.1  F-box only protein 16 isoform X1

    Conserved Domains (1) summary
    pfam12937
    Location:86 → 123
    F-box-like

  3. XM_030344438.1 → XP_030200298.1  F-box only protein 16 isoform X1

    Conserved Domains (1) summary
    pfam12937
    Location:86 → 123
    F-box-like

  4. XM_030344444.1 → XP_030200304.1  F-box only protein 16 isoform X6

  5. XM_030344442.1 → XP_030200302.1  F-box only protein 16 isoform X4

    Conserved Domains (1) summary
    pfam12937
    Location:86 → 123
    F-box-like

  6. XM_030344440.1 → XP_030200300.1  F-box only protein 16 isoform X2

    UniProtKB/TrEMBL
    A0A8C4Z5J6
    Conserved Domains (1) summary
    pfam12937
    Location:86 → 123
    F-box-like

  7. XM_030344445.1 → XP_030200305.1  F-box only protein 16 isoform X7

    Conserved Domains (1) summary
    pfam12937
    Location:86 → 123
    F-box-like

  8. XM_030344441.1 → XP_030200301.1  F-box only protein 16 isoform X3

    Conserved Domains (1) summary
    pfam12937
    Location:58 → 95
    F-box-like
Nucleotide Protein
Heading Accession and Version

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