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nubp1 nucleotide binding protein 1 (MinD homolog, E. coli) [ Gadus morhua (Atlantic cod) ]

Gene ID: 115558291, updated on 17-Mar-2024

Summary

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Gene symbol
nubp1
Gene description
nucleotide binding protein 1 (MinD homolog, E. coli)
See related
Ensembl:ENSGMOG00000015770
Gene type
protein coding
RefSeq status
MODEL
Organism
Gadus morhua
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
100 current gadMor3.0 (GCF_902167405.1) 2 NC_044049.1 (27018074..27026152, complement)

Chromosome 2 - NC_044049.1Genomic Context describing neighboring genes Neighboring gene Dexi homolog (mouse) Neighboring gene class II, major histocompatibility complex, transactivator Neighboring gene epithelial membrane protein 2 Neighboring gene lin-7 homolog B (C. elegans)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044049.1 Chromosome 2 Reference gadMor3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Atlantic cod reveals a unique immune system. Star B, et al. Nature, 2011 Aug 10. PMID 21832995, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent FeS chaperone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in iron-sulfur cluster assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic Fe-S cluster assembly factor NUBP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gadMor3.0 Primary Assembly

Genomic

  1. NC_044049.1 Reference gadMor3.0 Primary Assembly

    Range
    27018074..27026152 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030376278.1 → XP_030232138.1  cytosolic Fe-S cluster assembly factor NUBP1

    UniProtKB/TrEMBL
    A0A8C5BVD8
    Conserved Domains (1) summary
    pfam10609
    Location:65 → 315
    ParA; NUBPL iron-transfer P-loop NTPase

  2. XM_030376270.1 → XP_030232130.1  cytosolic Fe-S cluster assembly factor NUBP1

    UniProtKB/TrEMBL
    A0A8C5BVD8
    Related
    ENSGMOP00000051634.1, ENSGMOT00000055015.1
    Conserved Domains (1) summary
    pfam10609
    Location:65 → 315
    ParA; NUBPL iron-transfer P-loop NTPase
Nucleotide Protein
Heading Accession and Version

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