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Crisp3 cysteine-rich secretory protein 3 [ Mus musculus (house mouse) ]

Gene ID: 11572, updated on 29-Oct-2021

Summary

Official Symbol
Crisp3provided by MGI
Official Full Name
cysteine-rich secretory protein 3provided by MGI
Primary source
MGI:MGI:102552
See related
Ensembl:ENSMUSG00000025433
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Aeg2; CRS3; SGP28; CRISP-3
Expression
Low expression observed in reference dataset See more
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Genomic context

See Crisp3 in Genome Data Viewer
Location:
17 B2; 17 19.45 cM
Exon count:
8
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (40532668..40553179, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (40221777..40242288, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (40358726..40379207, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene TGFB-induced factor homeobox 2, pseudogene 2 Neighboring gene phosphoglycerate kinase 2 Neighboring gene cysteine-rich secretory protein 1 Neighboring gene solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular region ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in specific granule ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
cysteine-rich secretory protein 3
Names
SCP 2
acidic epididymal glycoprotein 2
sperm-coating glycoprotein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009639.3NP_033769.1  cysteine-rich secretory protein 3 precursor

    See identical proteins and their annotated locations for NP_033769.1

    Status: VALIDATED

    Source sequence(s)
    CV307357, L05560
    Consensus CDS
    CCDS28783.1
    UniProtKB/Swiss-Prot
    Q03402
    Related
    ENSMUSP00000026499.6, ENSMUST00000026499.6
    Conserved Domains (2) summary
    pfam08562
    Location:194241
    Crisp; Crisp
    cl00133
    Location:37172
    SCP; SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    40532668..40553179 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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