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LOC116412254 ubiquitin carboxyl-terminal hydrolase 40-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 116412254, updated on 13-Mar-2021

Summary

Gene symbol
LOC116412254
Gene description
ubiquitin carboxyl-terminal hydrolase 40-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

See LOC116412254 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (105105072..105167756)

Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene ribosomal protein L18 Neighboring gene sphingosine kinase 2 Neighboring gene D site of albumin promoter (albumin D-box) binding protein Neighboring gene carbonic anhydrase XI Neighboring gene sulfotransferase family 2B member 1

Genomic regions, transcripts, and products

Genomic Sequence:
NC_030683.2 Chromosome 7 Reference UCB_Xtro_10.0 Primary Assembly

General protein information

Preferred Names
ubiquitin carboxyl-terminal hydrolase 40-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    105105072..105167756
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031906050.1XP_031761910.1  ubiquitin carboxyl-terminal hydrolase 40-like isoform X1

    Conserved Domains (1) summary
    cl02553
    Location:41152
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
  2. XM_031906052.1XP_031761912.1  ubiquitin carboxyl-terminal hydrolase 40-like isoform X2

    Conserved Domains (1) summary
    cl02553
    Location:41130
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
  3. XM_031906051.1XP_031761911.1  ubiquitin carboxyl-terminal hydrolase 40-like isoform X1

    Conserved Domains (1) summary
    cl02553
    Location:41152
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

RNA

  1. XR_004223619.1 RNA Sequence

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