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vtg3 vitellogenin 3, phosvitinless [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116695776, updated on 18-Mar-2024

Summary

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Gene symbol
vtg3
Gene description
vitellogenin 3, phosvitinless
Locus tag
FQN60_012903
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Orthologs
zebrafish all
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Genomic context

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See vtg3 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
28
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 9 NC_045741.1 (19549751..19563130, complement)

Chromosome 9 - NC_045741.1Genomic Context describing neighboring genes Neighboring gene neuronal growth regulator 1 Neighboring gene uncharacterized LOC116695318 Neighboring gene vitellogenin-like Neighboring gene adhesion G protein-coupled receptor L4 Neighboring gene uncharacterized LOC116695717

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045741.1 Chromosome 9 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vitellogenin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045741.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    19549751..19563130 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032526231.1 → XP_032382122.1  vitellogenin-like

    UniProtKB/TrEMBL
    A0A5J5D4B7
    Conserved Domains (3) summary
    pfam01347
    Location:24 → 592
    Vitellogenin_N; Lipoprotein amino terminal region
    pfam09172
    Location:626 → 906
    DUF1943; Domain of unknown function (DUF1943)
    pfam09175
    Location:1085 → 1249
    DUF1944; Domain of unknown function (DUF1944)

  2. XM_032526232.1 → XP_032382123.1  vitellogenin-like

    UniProtKB/TrEMBL
    A0A5J5D4B7
    Conserved Domains (3) summary
    pfam01347
    Location:24 → 592
    Vitellogenin_N; Lipoprotein amino terminal region
    pfam09172
    Location:626 → 906
    DUF1943; Domain of unknown function (DUF1943)
    pfam09175
    Location:1085 → 1249
    DUF1944; Domain of unknown function (DUF1944)

  3. XM_032526230.1 → XP_032382121.1  vitellogenin-like

    UniProtKB/TrEMBL
    A0A5J5D4B7
    Conserved Domains (3) summary
    pfam01347
    Location:24 → 592
    Vitellogenin_N; Lipoprotein amino terminal region
    pfam09172
    Location:626 → 906
    DUF1943; Domain of unknown function (DUF1943)
    pfam09175
    Location:1085 → 1249
    DUF1944; Domain of unknown function (DUF1944)
Nucleotide Protein
Heading Accession and Version

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