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HOOK2 hook microtubule tethering protein 2 [ Lontra canadensis (Northern American river otter) ]

Gene ID: 116883136, updated on 18-Mar-2024

Summary

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Gene symbol
HOOK2
Gene description
hook microtubule tethering protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Lontra canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lontra
Orthologs
human mouse all
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Genomic context

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See HOOK2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current GSC_riverotter_1.0 (GCF_010015895.1) Unplaced Scaffold NW_022631082.1 (6595218..6606570, complement)

NW_022631082.1Genomic Context describing neighboring genes Neighboring gene guided entry of tail-anchored proteins factor 3, ATPase Neighboring gene bestrophin 2 Neighboring gene uncharacterized LOC116883140 Neighboring gene JunB proto-oncogene, AP-1 transcription factor subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022631082 Unplaced Scaffold Reference GSC_riverotter_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein light intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton-dependent intracellular transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Hook homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lontra canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_riverotter_1.0

Genomic

  1. NW_022631082.1 Reference GSC_riverotter_1.0

    Range
    6595218..6606570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032884129.1 → XP_032740020.1  protein Hook homolog 2 isoform X2

    Conserved Domains (2) summary
    pfam05622
    Location:179 → 702
    HOOK; HOOK protein
    pfam19047
    Location:7 → 157
    HOOK_N; HOOK domain

  2. XM_032884127.1 → XP_032740018.1  protein Hook homolog 2 isoform X1

    Conserved Domains (2) summary
    pfam05622
    Location:179 → 704
    HOOK; HOOK protein
    pfam19047
    Location:7 → 157
    HOOK_N; HOOK domain

  3. XM_032884130.1 → XP_032740021.1  protein Hook homolog 2 isoform X3

    Conserved Domains (2) summary
    pfam05622
    Location:147 → 672
    HOOK; HOOK protein
    pfam19047
    Location:37 → 125
    HOOK_N; HOOK domain

  4. XM_032884131.1 → XP_032740022.1  protein Hook homolog 2 isoform X4

    Conserved Domains (2) summary
    pfam05622
    Location:44 → 569
    HOOK; HOOK protein
    pfam19047
    Location:1 → 22
    HOOK_N; HOOK domain
Nucleotide Protein
Heading Accession and Version

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