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NBR1 NBR1 autophagy cargo receptor [ Trachypithecus francoisi (Francois's langur) ]

Gene ID: 117066918, updated on 30-Sep-2021

Summary

Gene symbol
NBR1
Gene description
NBR1 autophagy cargo receptor
See related
EnsemblRapid:ENSTFRG00000007055
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachypithecus francoisi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Trachypithecus
Orthologs
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Genomic context

See NBR1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
100 current Tfra_2.0 (GCF_009764315.1) Unplaced Scaffold NW_022681466.1 (17075239..17130793, complement)

NW_022681466.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene coiled-coil domain containing 200 Neighboring gene transmembrane protein 106A Neighboring gene BRCA1 DNA repair associated Neighboring gene Rho family GTPase 2 Neighboring gene vesicle amine transport 1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_022681466 Unplaced Scaffold Reference Tfra_2.0 Primary Assembly

General protein information

Preferred Names
next to BRCA1 gene 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachypithecus francoisi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tfra_2.0 Primary Assembly

Genomic

  1. NW_022681466.1 Reference Tfra_2.0 Primary Assembly

    Range
    17075239..17130793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033182867.1XP_033038758.1  next to BRCA1 gene 1 protein isoform X5

    Conserved Domains (3) summary
    cd02340
    Location:146190
    ZZ_NBR1_like; Zinc finger, ZZ type. Zinc finger present in Drosophila ref(2)P, NBR1, Human sequestosome 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Drosophila ref(2)P appears ...
    cd14319
    Location:843881
    UBA_NBR1; UBA domain of next to BRCA1 gene 1 protein (NBR1) and similar proteins
    cd14947
    Location:300410
    NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins
  2. XM_033182863.1XP_033038754.1  next to BRCA1 gene 1 protein isoform X1

    Related
    ENSTFRP00000008490.1, ENSTFRT00000010628.1
    Conserved Domains (4) summary
    cd06396
    Location:585
    PB1_NBR1; The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62. A canonical PB1-PB1 interaction, which involves ...
    cd02340
    Location:215259
    ZZ_NBR1_like; Zinc finger, ZZ type. Zinc finger present in Drosophila ref(2)P, NBR1, Human sequestosome 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Drosophila ref(2)P appears ...
    cd14319
    Location:912950
    UBA_NBR1; UBA domain of next to BRCA1 gene 1 protein (NBR1) and similar proteins
    cd14947
    Location:369479
    NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins
  3. XM_033182862.1XP_033038753.1  next to BRCA1 gene 1 protein isoform X1

    Conserved Domains (4) summary
    cd06396
    Location:585
    PB1_NBR1; The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62. A canonical PB1-PB1 interaction, which involves ...
    cd02340
    Location:215259
    ZZ_NBR1_like; Zinc finger, ZZ type. Zinc finger present in Drosophila ref(2)P, NBR1, Human sequestosome 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Drosophila ref(2)P appears ...
    cd14319
    Location:912950
    UBA_NBR1; UBA domain of next to BRCA1 gene 1 protein (NBR1) and similar proteins
    cd14947
    Location:369479
    NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins
  4. XM_033182861.1XP_033038752.1  next to BRCA1 gene 1 protein isoform X1

    Conserved Domains (4) summary
    cd06396
    Location:585
    PB1_NBR1; The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62. A canonical PB1-PB1 interaction, which involves ...
    cd02340
    Location:215259
    ZZ_NBR1_like; Zinc finger, ZZ type. Zinc finger present in Drosophila ref(2)P, NBR1, Human sequestosome 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Drosophila ref(2)P appears ...
    cd14319
    Location:912950
    UBA_NBR1; UBA domain of next to BRCA1 gene 1 protein (NBR1) and similar proteins
    cd14947
    Location:369479
    NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins
  5. XM_033182865.1XP_033038756.1  next to BRCA1 gene 1 protein isoform X3

    Conserved Domains (4) summary
    cd02340
    Location:150194
    ZZ_NBR1_like; Zinc finger, ZZ type. Zinc finger present in Drosophila ref(2)P, NBR1, Human sequestosome 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Drosophila ref(2)P appears ...
    cd14319
    Location:847885
    UBA_NBR1; UBA domain of next to BRCA1 gene 1 protein (NBR1) and similar proteins
    cd14947
    Location:304414
    NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins
    cl02720
    Location:570
    PB1; The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 ...
  6. XM_033182864.1XP_033038755.1  next to BRCA1 gene 1 protein isoform X2

    Related
    ENSTFRP00000008662.1, ENSTFRT00000010832.1
    Conserved Domains (4) summary
    cd06396
    Location:585
    PB1_NBR1; The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62. A canonical PB1-PB1 interaction, which involves ...
    cd14319
    Location:856894
    UBA_NBR1; UBA domain of next to BRCA1 gene 1 protein (NBR1) and similar proteins
    cd14947
    Location:313423
    NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins
    cl00295
    Location:215231
    ZZ; Zinc finger, ZZ type. Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ZZ motif coordinates one or two zinc ions and most likely participates in ligand binding or molecular scaffolding. Many proteins containing ZZ motifs have ...
  7. XM_033182866.1XP_033038757.1  next to BRCA1 gene 1 protein isoform X4

    Related
    ENSTFRP00000008707.1, ENSTFRT00000010891.1
    Conserved Domains (4) summary
    cd06396
    Location:585
    PB1_NBR1; The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62. A canonical PB1-PB1 interaction, which involves ...
    cd02340
    Location:215259
    ZZ_NBR1_like; Zinc finger, ZZ type. Zinc finger present in Drosophila ref(2)P, NBR1, Human sequestosome 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Drosophila ref(2)P appears ...
    cd14319
    Location:842880
    UBA_NBR1; UBA domain of next to BRCA1 gene 1 protein (NBR1) and similar proteins
    cd14947
    Location:299409
    NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins