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psmb2 proteasome 20S subunit beta 2 [ Trematomus bernacchii (emerald rockcod) ]

Gene ID: 117478198, updated on 19-Mar-2024

Summary

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Gene symbol
psmb2
Gene description
proteasome 20S subunit beta 2
See related
EnsemblRapid:ENSTBNG00005004321
Gene type
protein coding
RefSeq status
MODEL
Organism
Trematomus bernacchii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Trematomus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current fTreBer1.1 (GCF_902827165.1) Unplaced Scaffold NW_022987564.1 (14921499..14935526)

NW_022987564.1Genomic Context describing neighboring genes Neighboring gene claspin Neighboring gene UPF0500 protein C1orf216 homolog Neighboring gene cell division cycle associated 5 Neighboring gene transcription factor AP-2 epsilon Neighboring gene neurochondrin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022987564 Unplaced Scaffold Reference fTreBer1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Uncommon functional properties of the first piscine 26S proteasome from the Antarctic notothenioid Trematomus bernacchii. Gogliettino M, et al. Biosci Rep, 2016. PMID 26933238, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasomal protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, beta-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit beta type-2
Names
proteasome subunit beta 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trematomus bernacchii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTreBer1.1

Genomic

  1. NW_022987564.1 Reference fTreBer1.1

    Range
    14921499..14935526
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034125141.1 → XP_033981032.1  proteasome subunit beta type-2

    UniProtKB/TrEMBL
    A0A159FZQ8
    Related
    ENSTBNP00005007835.1, ENSTBNT00005008263.1
    Conserved Domains (1) summary
    cd03758
    Location:1 → 192
    proteasome_beta_type_2; proteasome beta type-2 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...
Nucleotide Protein
Heading Accession and Version

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