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SWI5 SWI5 homologous recombination repair protein [ Trachemys scripta elegans ]

Gene ID: 117867157, updated on 19-Mar-2024

Summary

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Gene symbol
SWI5
Gene description
SWI5 homologous recombination repair protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachemys scripta elegans (sub-species: elegans)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
6
Annotation release Status Assembly Chr Location
100 current CAS_Tse_1.0 (GCF_013100865.1) 17 NC_048314.1 (13311730..13320668, complement)

Chromosome 17 - NC_048314.1Genomic Context describing neighboring genes Neighboring gene coenzyme Q4 Neighboring gene TruB pseudouridine synthase family member 2 Neighboring gene golgin A2 Neighboring gene dynamin 1 Neighboring gene CDKN1A interacting zinc finger protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048314.1 Chromosome 17 Reference CAS_Tse_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta). Kaplinsky NJ, et al. PLoS One, 2013. PMID 23840449, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Swi5-Sfr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Swi5-Swi2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA repair protein SWI5 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachemys scripta elegans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAS_Tse_1.0 Primary Assembly

Genomic

  1. NC_048314.1 Reference CAS_Tse_1.0 Primary Assembly

    Range
    13311730..13320668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034751973.1 → XP_034607864.1  DNA repair protein SWI5 homolog isoform X2

  2. XM_034751971.1 → XP_034607862.1  DNA repair protein SWI5 homolog isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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