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INIP INTS3 and NABP interacting protein [ Trachemys scripta elegans ]

Gene ID: 117879071, updated on 19-Mar-2024

Summary

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Gene symbol
INIP
Gene description
INTS3 and NABP interacting protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachemys scripta elegans (sub-species: elegans)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys
Orthologs
human mouse all
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Genomic context

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See INIP in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
100 current CAS_Tse_1.0 (GCF_013100865.1) 6 NC_048303.1 (115974622..115989260, complement)

Chromosome 6 - NC_048303.1Genomic Context describing neighboring genes Neighboring gene hydroxysteroid dehydrogenase like 2 Neighboring gene KIAA1958 ortholog Neighboring gene sorting nexin family member 30 Neighboring gene solute carrier family 46 member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048303.1 Chromosome 6 Reference CAS_Tse_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta). Kaplinsky NJ, et al. PLoS One, 2013. PMID 23840449, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SOSS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SOSS complex subunit C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachemys scripta elegans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAS_Tse_1.0 Primary Assembly

Genomic

  1. NC_048303.1 Reference CAS_Tse_1.0 Primary Assembly

    Range
    115974622..115989260 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034774004.1 → XP_034629895.1  SOSS complex subunit C isoform X2

  2. XM_034774003.1 → XP_034629894.1  SOSS complex subunit C isoform X1

  3. XM_034774005.1 → XP_034629896.1  SOSS complex subunit C isoform X1

  4. XM_034774009.1 → XP_034629900.1  SOSS complex subunit C isoform X3

    Conserved Domains (1) summary
    pfam15925
    Location:18 → 101
    SOSSC; SOSS complex subunit C

  5. XM_034774008.1 → XP_034629899.1  SOSS complex subunit C isoform X2

  6. XM_034774007.1 → XP_034629898.1  SOSS complex subunit C isoform X2

  7. XM_034774006.1 → XP_034629897.1  SOSS complex subunit C isoform X1

  8. XM_034774010.1 → XP_034629901.1  SOSS complex subunit C isoform X4

  9. XM_034774011.1 → XP_034629902.1  SOSS complex subunit C isoform X5

    Conserved Domains (1) summary
    pfam15925
    Location:4 → 71
    SOSSC; SOSS complex subunit C
Nucleotide Protein
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