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exoc6 exocyst complex component 6 [ Scophthalmus maximus (turbot) ]

Gene ID: 118287129, updated on 3-Apr-2024

Summary

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Gene symbol
exoc6
Gene description
exocyst complex component 6
See related
EnsemblRapid:ENSSMAG00025016582
Gene type
protein coding
RefSeq status
MODEL
Organism
Scophthalmus maximus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 16
Exon count:
26
Annotation release Status Assembly Chr Location
101 current ASM2237912v1 (GCF_022379125.1) 16 NC_061530.1 (4222555..4277086, complement)
100 previous assembly ASM1334776v1 (GCF_013347765.1) 18 NC_049705.1 (4779509..4833523, complement)

Chromosome 16 - NC_061530.1Genomic Context describing neighboring genes Neighboring gene jumonji domain containing 1Cb Neighboring gene cytochrome P450 26A1 Neighboring gene hematopoietically expressed homeobox Neighboring gene TruB pseudouridine (psi) synthase family member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-throughput sequence analysis of turbot (Scophthalmus maximus) transcriptome using 454-pyrosequencing for the discovery of antiviral immune genes. Pereiro P, et al. PLoS One, 2012. PMID 22629298, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi to plasma membrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle tethering involved in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of exocyst IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exocyst complex component 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237912v1 Primary Assembly

Genomic

  1. NC_061530.1 Reference ASM2237912v1 Primary Assembly

    Range
    4222555..4277086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035611957.2 → XP_035467850.1  exocyst complex component 6 isoform X1

    UniProtKB/TrEMBL
    A0A8D3EE60
    Conserved Domains (1) summary
    pfam04091
    Location:469 → 786
    Sec15; Exocyst complex subunit Sec15-like

  2. XM_035611958.2 → XP_035467851.1  exocyst complex component 6 isoform X2

    UniProtKB/TrEMBL
    A0A8D3EE60
    Conserved Domains (1) summary
    pfam04091
    Location:469 → 785
    Sec15; Exocyst complex subunit Sec15-like

  3. XM_035611960.2 → XP_035467853.1  exocyst complex component 6 isoform X4

    UniProtKB/TrEMBL
    A0A8D2ZFK9, A0A8D3EE60
    Related
    ENSSMAP00025053825.1, ENSSMAT00025056896.1
    Conserved Domains (1) summary
    pfam04091
    Location:469 → 775
    Sec15; Exocyst complex subunit Sec15-like

  4. XM_035611959.2 → XP_035467852.1  exocyst complex component 6 isoform X3

    UniProtKB/TrEMBL
    A0A8D3EE60
    Related
    ENSSMAP00025053822.1, ENSSMAT00025056893.1
    Conserved Domains (1) summary
    pfam04091
    Location:469 → 776
    Sec15; Exocyst complex subunit Sec15-like

  5. XM_035611962.2 → XP_035467855.1  exocyst complex component 6 isoform X6

    UniProtKB/TrEMBL
    A0A2U9CKP9, A0A8D3EE60
    Related
    ENSSMAP00025053749.1, ENSSMAT00025056805.1
    Conserved Domains (1) summary
    pfam04091
    Location:455 → 761
    Sec15; Exocyst complex subunit Sec15-like

  6. XM_047327481.1 → XP_047183437.1  exocyst complex component 6 isoform X8

    Related
    ENSSMAP00025053756.1, ENSSMAT00025056816.1

  7. XM_035611961.2 → XP_035467854.1  exocyst complex component 6 isoform X5

    UniProtKB/TrEMBL
    A0A8D2ZFS8, A0A8D3EE60
    Conserved Domains (1) summary
    pfam04091
    Location:455 → 772
    Sec15; Exocyst complex subunit Sec15-like

  8. XM_047327480.1 → XP_047183436.1  exocyst complex component 6 isoform X7

Nucleotide Protein Strain
Heading Accession and Version

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