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pdxdc1 pyridoxal-dependent decarboxylase domain containing 1 [ Morone saxatilis (striped sea-bass) ]

Gene ID: 118322496, updated on 5-Aug-2021

Summary

Gene symbol
pdxdc1
Gene description
pyridoxal-dependent decarboxylase domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Morone saxatilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Moronidae; Morone
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

See pdxdc1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current NCSU_SB_2.0 (GCF_004916995.1) Unplaced Scaffold NW_023339696.1 (1152267..1182912, complement)

NW_023339696.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein 39A Neighboring gene transmembrane protein 238 Neighboring gene G1 to S phase transition 1, like Neighboring gene growth arrest and DNA damage-inducible proteins-interacting protein 1-like Neighboring gene phosphoribosyl pyrophosphate synthase-associated protein 2

Genomic regions, transcripts, and products

Genomic Sequence:
NW_023339696 Unplaced Scaffold Reference NCSU_SB_2.0 Primary Assembly

General protein information

Preferred Names
pyridoxal-dependent decarboxylase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morone saxatilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_SB_2.0 Primary Assembly

Genomic

  1. NW_023339696.1 Reference NCSU_SB_2.0 Primary Assembly

    Range
    1152267..1182912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035654180.1XP_035510073.1  pyridoxal-dependent decarboxylase domain-containing protein 1

    Conserved Domains (1) summary
    cl18945
    Location:199390
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
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