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swi5 SWI5 homologous recombination repair protein [ Morone saxatilis (striped sea-bass) ]

Gene ID: 118332286, updated on 20-Mar-2024

Summary

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Gene symbol
swi5
Gene description
SWI5 homologous recombination repair protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Morone saxatilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Moronidae; Morone
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current NCSU_SB_2.0 (GCF_004916995.1) Unplaced Scaffold NW_023339774.1 (10112996..10119647, complement)

NW_023339774.1Genomic Context describing neighboring genes Neighboring gene prostaglandin D2 synthase a Neighboring gene solute carrier family 27 member 4 Neighboring gene family with sequence similarity 163 member B, genome duplicate a Neighboring gene dopamine beta-hydroxylase (dopamine beta-monooxygenase)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023339774 Unplaced Scaffold Reference NCSU_SB_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome annotation and marker discovery in white bass (Morone chrysops) and striped bass (Morone saxatilis). Li C, et al. Anim Genet, 2014 Dec. PMID 25160849

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Swi5-Sfr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Swi5-Swi2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA repair protein SWI5 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morone saxatilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_SB_2.0 Primary Assembly

Genomic

  1. NW_023339774.1 Reference NCSU_SB_2.0 Primary Assembly

    Range
    10112996..10119647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035667486.1 → XP_035523379.1  DNA repair protein SWI5 homolog

    Conserved Domains (1) summary
    pfam07061
    Location:62 → 135
    Swi5
Nucleotide Protein
Heading Accession and Version

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