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ZBTB8A zinc finger and BTB domain containing 8A [ Talpa occidentalis (Iberian mole) ]

Gene ID: 119235126, updated on 21-Mar-2024

Summary

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Gene symbol
ZBTB8A
Gene description
zinc finger and BTB domain containing 8A
Gene type
protein coding
RefSeq status
MODEL
Organism
Talpa occidentalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Talpa
Orthologs
human mouse all
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Genomic context

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See ZBTB8A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current MPIMG_talOcc4v2.1 (GCF_014898055.3) Unplaced Scaffold NW_023605305.1 (18966559..19014975)

NW_023605305.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 229 member A Neighboring gene testis specific serine kinase 3 Neighboring gene zinc finger and BTB domain containing 8B Neighboring gene BSD domain containing 1 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene zinc finger and BTB domain containing 8 opposite strand

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023605305 Unplaced Scaffold Reference MPIMG_talOcc4v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 8A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014898055.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MPIMG_talOcc4v2.1 Primary Assembly

Genomic

  1. NW_023605305.1 Reference MPIMG_talOcc4v2.1 Primary Assembly

    Range
    18966559..19014975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037498224.2 → XP_037354121.1  zinc finger and BTB domain-containing protein 8A isoform X1

    Conserved Domains (4) summary
    sd00017
    Location:284 → 304
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18329
    Location:3 → 118
    BTB_POZ_ZBTB8A_BOZF1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8A (ZBTB8A)
    pfam13465
    Location:296 → 321
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:282 → 306
    zf-H2C2_5; C2H2-type zinc-finger domain

  2. XM_037498227.2 → XP_037354124.1  zinc finger and BTB domain-containing protein 8A isoform X3

    Conserved Domains (4) summary
    sd00017
    Location:284 → 304
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18329
    Location:3 → 118
    BTB_POZ_ZBTB8A_BOZF1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8A (ZBTB8A)
    pfam13465
    Location:296 → 321
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:282 → 306
    zf-H2C2_5; C2H2-type zinc-finger domain

  3. XM_037498226.2 → XP_037354123.1  zinc finger and BTB domain-containing protein 8A isoform X2

    Conserved Domains (4) summary
    sd00017
    Location:284 → 304
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18329
    Location:3 → 118
    BTB_POZ_ZBTB8A_BOZF1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8A (ZBTB8A)
    pfam13465
    Location:296 → 321
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:282 → 306
    zf-H2C2_5; C2H2-type zinc-finger domain
Nucleotide Protein
Heading Accession and Version

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