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extl3 exostosin-like glycosyltransferase 3 [ Micropterus salmoides (largemouth bass) ]

Gene ID: 119908552, updated on 21-Mar-2024

Summary

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Gene symbol
extl3
Gene description
exostosin-like glycosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Micropterus salmoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Centrarchidae; Micropterus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM1485139v1 (GCF_014851395.1) Unplaced Scaffold NW_024040928.1 (20035966..20068694)

NW_024040928.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1-like Neighboring gene ribosomal oxygenase 1 Neighboring gene synaptotagmin XIVb Neighboring gene cytosolic 5'-nucleotidase 1A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024040928 Unplaced Scaffold Reference ASM1485139v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Discovery and validation of gene-linked diagnostic SNP markers for assessing hybridization between Largemouth bass (Micropterus salmoides) and Florida bass (M. floridanus). Li C, et al. Mol Ecol Resour, 2015 Mar. PMID 25047482

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Micropterus salmoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485139v1 Primary Assembly

Genomic

  1. NW_024040928.1 Reference ASM1485139v1 Primary Assembly

    Range
    20035966..20068694
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038726329.1 → XP_038582257.1  exostosin-like 3

    Conserved Domains (3) summary
    COG1196
    Location:69 → 141
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam03016
    Location:183 → 497
    Exostosin; Exostosin family
    pfam09258
    Location:660 → 897
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
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