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CCN1 cellular communication network factor 1 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120371183, updated on 21-Mar-2024

Summary

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Gene symbol
CCN1
Gene description
cellular communication network factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 8 NC_052630.1 (80453428..80456028, complement)

Linkage Group 8 - NC_052630.1Genomic Context describing neighboring genes Neighboring gene collagen type XXIV alpha 1 chain Neighboring gene uncharacterized LOC120370048 Neighboring gene uncharacterized LOC120370047 Neighboring gene zinc finger HIT-type containing 6 Neighboring gene dimethylarginine dimethylaminohydrolase 1 Neighboring gene BCL10 immune signaling adaptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052630.1 Chromosome 8 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCN family member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052630.1 Reference ASM1616193v1 Primary Assembly

    Range
    80453428..80456028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039486791.1 → XP_039342725.1  CCN family member 1

    Conserved Domains (4) summary
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:224 → 267
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:289 → 371
    GHB_like; Glycoprotein hormone beta chain homologues
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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