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ZEB1 zinc finger E-box binding homeobox 1 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120397619, updated on 21-Mar-2024

Summary

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Gene symbol
ZEB1
Gene description
zinc finger E-box binding homeobox 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 2 NC_052624.1 (29983243..30236561, complement)

Linkage Group 2 - NC_052624.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 5B Neighboring gene Rho GTPase activating protein 12 Neighboring gene uncharacterized LOC120396818 Neighboring gene uncharacterized LOC120398432 Neighboring gene zinc finger protein 438

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052624.1 Chromosome 2 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger E-box-binding homeobox 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052624.1 Reference ASM1616193v1 Primary Assembly

    Range
    29983243..30236561 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039523785.1 → XP_039379719.1  zinc finger E-box-binding homeobox 1

    Conserved Domains (5) summary
    sd00017
    Location:907 → 927
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:241 → 263
    zf-C2H2; Zinc finger, C2H2 type
    pfam08690
    Location:61 → 171
    GET2; GET complex subunit GET2
    pfam13465
    Location:947 → 972
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:594 → 630
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

RNA

  1. XR_005593894.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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