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LOC120896472 gamma-aminobutyric acid receptor subunit beta [ Anopheles arabiensis ]

Gene ID: 120896472, updated on 26-Mar-2024

Summary

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Gene symbol
LOC120896472
Gene description
gamma-aminobutyric acid receptor subunit beta
See related
VectorBase:AARA21_012003
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles arabiensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Also known as
Rdl
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Genomic context

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Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
100 current AaraD3 (GCF_016920715.1) 2 NC_053517.1 (100174585..100250278, complement)

Chromosome 2 - NC_053517.1Genomic Context describing neighboring genes Neighboring gene mitoferrin Neighboring gene uncharacterized LOC120896475 Neighboring gene glutamate receptor 1-like Neighboring gene glutamate receptor 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053517.1 Chromosome 2 Reference AaraD3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of the Insecticide Target Rdl in African Anopheles Is Driven by Interspecific and Interkaryotypic Introgression. Grau-Bové X, et al. Mol Biol Evol, 2020 Oct 1. PMID 32449755, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Evolution of the Insecticide Target Rdl in African Anopheles Is Driven by Interspecific and Interkaryotypic Introgression.
    Title: Evolution of the Insecticide Target Rdl in African Anopheles Is Driven by Interspecific and Interkaryotypic Introgression.
Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GABA-A receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular ligand-gated monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-aminobutyric acid receptor subunit beta
Names
GABA receptor subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anopheles arabiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaraD3 Primary Assembly

Genomic

  1. NC_053517.1 Reference AaraD3 Primary Assembly

    Range
    100174585..100250278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040300619.1 → XP_040156553.1  gamma-aminobutyric acid receptor subunit beta isoform X3

    Conserved Domains (2) summary
    TIGR00860
    Location:56 → 537
    LIC; Cation transporter family protein
    cd19008
    Location:78 → 261
    LGIC_ECD_GABAR_RDL-like; gamma-aminobutyric acid receptor subunit beta-like extracellular domain in protostomia, such as RDL (resistant to dieldrin)

  2. XM_040300617.1 → XP_040156551.1  gamma-aminobutyric acid receptor subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A1Y9GKS7
    Conserved Domains (2) summary
    TIGR00860
    Location:56 → 537
    LIC; Cation transporter family protein
    cd19008
    Location:78 → 261
    LGIC_ECD_GABAR_RDL-like; gamma-aminobutyric acid receptor subunit beta-like extracellular domain in protostomia, such as RDL (resistant to dieldrin)

  3. XM_040300621.1 → XP_040156555.1  gamma-aminobutyric acid receptor subunit beta isoform X5

    Conserved Domains (2) summary
    TIGR00860
    Location:3 → 442
    LIC; Cation transporter family protein
    cd19008
    Location:3 → 166
    LGIC_ECD_GABAR_RDL-like; gamma-aminobutyric acid receptor subunit beta-like extracellular domain in protostomia, such as RDL (resistant to dieldrin)

  4. XM_040300613.1 → XP_040156547.1  gamma-aminobutyric acid receptor subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A1Y9GKS7
    Conserved Domains (2) summary
    TIGR00860
    Location:56 → 537
    LIC; Cation transporter family protein
    cd19008
    Location:78 → 261
    LGIC_ECD_GABAR_RDL-like; gamma-aminobutyric acid receptor subunit beta-like extracellular domain in protostomia, such as RDL (resistant to dieldrin)

  5. XM_040300615.1 → XP_040156549.1  gamma-aminobutyric acid receptor subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A1Y9GKS7
    Conserved Domains (2) summary
    TIGR00860
    Location:56 → 537
    LIC; Cation transporter family protein
    cd19008
    Location:78 → 261
    LGIC_ECD_GABAR_RDL-like; gamma-aminobutyric acid receptor subunit beta-like extracellular domain in protostomia, such as RDL (resistant to dieldrin)

  6. XM_040300616.1 → XP_040156550.1  gamma-aminobutyric acid receptor subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A1Y9GKS7
    Conserved Domains (2) summary
    TIGR00860
    Location:56 → 537
    LIC; Cation transporter family protein
    cd19008
    Location:78 → 261
    LGIC_ECD_GABAR_RDL-like; gamma-aminobutyric acid receptor subunit beta-like extracellular domain in protostomia, such as RDL (resistant to dieldrin)

  7. XM_040300618.1 → XP_040156552.1  gamma-aminobutyric acid receptor subunit beta isoform X2

    Conserved Domains (2) summary
    TIGR00860
    Location:56 → 537
    LIC; Cation transporter family protein
    cd19008
    Location:78 → 261
    LGIC_ECD_GABAR_RDL-like; gamma-aminobutyric acid receptor subunit beta-like extracellular domain in protostomia, such as RDL (resistant to dieldrin)

  8. XM_040300620.1 → XP_040156554.1  gamma-aminobutyric acid receptor subunit beta isoform X4

    Conserved Domains (2) summary
    TIGR00860
    Location:56 → 537
    LIC; Cation transporter family protein
    cd19008
    Location:78 → 261
    LGIC_ECD_GABAR_RDL-like; gamma-aminobutyric acid receptor subunit beta-like extracellular domain in protostomia, such as RDL (resistant to dieldrin)
Nucleotide Protein
Heading Accession and Version

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