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LOC121853009 Sharpr-MPRA regulatory region 8218 [ Homo sapiens (human) ]

Gene ID: 121853009, discontinued on 18-Nov-2022

Summary

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Gene symbol
LOC121853009
Gene description
Sharpr-MPRA regulatory region 8218
Gene type
biological region
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This genomic sequence was predicted to be a transcriptional regulatory region based on chromatin state analysis from the ENCODE (ENCyclopedia Of DNA Elements) project. It was validated as a functional enhancer by the Sharpr-MPRA technique (Systematic high-resolution activation and repression profiling with reporter tiling using massively parallel reporter assays) in HepG2 liver carcinoma cells (group: HepG2 Activating DNase unmatched - State 1:Tss, active promoter, TSS/CpG island region). [provided by RefSeq, Jul 2021]
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Genomic context

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Location:
20q
Annotation release Status Assembly Chr Location
110 latest, but not current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (47359125..47359419)
110 latest, but not current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (49097407..49097701)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (45987869..45988163)

Bibliography

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GeneRIFs: Gene References Into Functions

Variation

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See Variation Viewer (GRCh37.p13)