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trmt12 tRNA methyltransferase 12 homolog [ Chiloscyllium plagiosum (whitespotted bambooshark) ]

Gene ID: 122557175, updated on 22-Mar-2024

Summary

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Gene symbol
trmt12
Gene description
tRNA methyltransferase 12 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Chiloscyllium plagiosum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Chiloscyllium
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 15
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM401019v2 (GCF_004010195.1) 15 NC_057724.1 (28871392..28899014, complement)

Chromosome 15 - NC_057724.1Genomic Context describing neighboring genes Neighboring gene transmembrane gamma-carboxyglutamic acid protein 3 Neighboring gene uncharacterized LOC122557172 Neighboring gene mitochondrial fission factor-like Neighboring gene synaptotagmin-like 4 Neighboring gene cleavage stimulation factor, 3' pre-RNA, subunit 2 Neighboring gene cytochrome b-245 heavy chain-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057724.1 Chromosome 15 Reference ASM401019v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA wybutosine-synthesizing protein 2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chiloscyllium plagiosum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM401019v2 Primary Assembly

Genomic

  1. NC_057724.1 Reference ASM401019v2 Primary Assembly

    Range
    28871392..28899014 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043704574.1 → XP_043560509.1  tRNA wybutosine-synthesizing protein 2 homolog

    Conserved Domains (1) summary
    COG2520
    Location:15 → 323
    Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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