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rad51ap1 RAD51 associated protein 1 [ Thunnus albacares (yellowfin tuna) ]

Gene ID: 122975101, updated on 22-Mar-2024

Summary

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Gene symbol
rad51ap1
Gene description
RAD51 associated protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Thunnus albacares
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Thunnus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 23
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fThuAlb1.1 (GCF_914725855.1) 23 NC_058128.1 (9042981..9046785)

Chromosome 23 - NC_058128.1Genomic Context describing neighboring genes Neighboring gene TP53 induced glycolysis regulatory phosphatase b Neighboring gene fibroblast growth factor 23 Neighboring gene fibroblast growth factor 6-like Neighboring gene probable polypeptide N-acetylgalactosaminyltransferase 8 Neighboring gene adenosine deaminase 2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058128.1 Chromosome 23 Reference fThuAlb1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitutions in the Glycogenin-1 Gene Are Associated with the Evolution of Endothermy in Sharks and Tunas. Ciezarek AG, et al. Genome Biol Evol, 2016 Oct 5. PMID 27614233, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RAD51-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thunnus albacares Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fThuAlb1.1

Genomic

  1. NC_058128.1 Reference fThuAlb1.1

    Range
    9042981..9046785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044343313.1 → XP_044199248.1  RAD51-associated protein 1 isoform X1

    Conserved Domains (1) summary
    cl01319
    Location:95 → 196
    HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain

  2. XM_044343314.1 → XP_044199249.1  RAD51-associated protein 1 isoform X2

    Conserved Domains (1) summary
    cl01319
    Location:95 → 196
    HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
Nucleotide Protein
Heading Accession and Version

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