U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SPIB Spi-B transcription factor [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123030628, updated on 22-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SPIB
Gene description
Spi-B transcription factor
See related
Ensembl:ENSVKKG00000002126
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025336011.1 (6473387..6486327)

NW_025336011.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 1 group H member 2 Neighboring gene DNA polymerase delta 1, catalytic subunit Neighboring gene myosin binding protein C2 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene golgi associated RAB2 interactor 5A

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_025336011 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor Spi-B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025336011.1 Reference ASM479886v1

    Range
    6473387..6486327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044444714.1 → XP_044300649.1  transcription factor Spi-B isoform X2

    Conserved Domains (1) summary
    smart00413
    Location:161 → 245
    ETS; erythroblast transformation specific domain

  2. XM_044444713.1 → XP_044300648.1  transcription factor Spi-B isoform X1

    UniProtKB/TrEMBL
    A0A8D2IRZ0
    Related
    ENSVKKP00000002685.1, ENSVKKT00000002760.1
    Conserved Domains (1) summary
    smart00413
    Location:174 → 258
    ETS; erythroblast transformation specific domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.