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oppA oligopeptide transport protein with chaperone properties [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1253265, updated on 8-Sep-2017

Summary

Gene symbol
oppA
Gene description
oligopeptide transport protein with chaperone properties
Locus tag
STM1746
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2; SGSC 1412; ATCC 700720, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, old-name: Salmonella typhimurium LT2)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella

Genomic context

Sequence:
NC_003197.2 (1839602..1841396, complement)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene oligopeptide ABC transporter ATP-binding protein OppD Neighboring gene peptide ABC transporter permease Neighboring gene oligopeptide transporter permease Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene bifunctional acetaldehyde-CoA/alcohol dehydrogenase

Pathways from BioSystems

  • ABC transporters, organism-specific biosystem (from KEGG)
    ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • ABC transporters, conserved biosystem (from KEGG)
    ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • Oligopeptide transport system, organism-specific biosystem (from KEGG)
    Oligopeptide transport system, organism-specific biosystemStructural complex; Environmental information processing; Peptide and nickel transport system
  • Oligopeptide transport system, conserved biosystem (from KEGG)
    Oligopeptide transport system, conserved biosystemStructural complex; Environmental information processing; Peptide and nickel transport system
  • Quorum sensing, organism-specific biosystem (from KEGG)
    Quorum sensing, organism-specific biosystemQuorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal mol...
  • Quorum sensing, conserved biosystem (from KEGG)
    Quorum sensing, conserved biosystemQuorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal mol...
  • beta-Lactam resistance, organism-specific biosystem (from KEGG)
    beta-Lactam resistance, organism-specific biosystemThe beta-lactam antibiotics are the most widely used group of antibiotics, which exert their effect by interfering with the structural crosslinking of peptidoglycans in bacterial cell walls. Over the...
  • beta-Lactam resistance, conserved biosystem (from KEGG)
    beta-Lactam resistance, conserved biosystemThe beta-lactam antibiotics are the most widely used group of antibiotics, which exert their effect by interfering with the structural crosslinking of peptidoglycans in bacterial cell walls. Over the...

General gene information

regulatory

  • Loc: c1841367-1841362 regulatory_class = ribosome_binding_site
  • Loc: c1841377-1841369 regulatory_class = minus_10_signal
  • Loc: c1841396-1841388 regulatory_class = minus_35_signal

General protein information

Names
oligopeptide transport protein with chaperone properties
NP_460705.3
  • ABC superfamily (periplasm); periplasmic oligopeptide-binding protein precursor. (SW:OPPA_SALTY)

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    1839602..1841396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_460705.3 oligopeptide transport protein with chaperone properties [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P06202
    Conserved Domains (1) summary
    PRK15104
    Location:40582
    PRK15104; oligopeptide ABC transporter substrate-binding protein OppA; Provisional
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