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LOC1272247 integrin alpha-PS2 [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1272247, updated on 4-Jan-2024

Summary

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Gene symbol
LOC1272247
Gene description
integrin alpha-PS2
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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Genomic context

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See LOC1272247 in Genome Data Viewer
Location:
chromosome: X
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (431707..453881)

Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene histone lysine acetyltransferase CREBBP Neighboring gene uncharacterized LOC133394011 Neighboring gene uncharacterized LOC133394013 Neighboring gene protein retinal degeneration B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-PS2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    431707..453881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061662082.1 → XP_061518066.1  integrin alpha-PS2 isoform X1

  2. XM_061662099.1 → XP_061518083.1  integrin alpha-PS2 isoform X2

  3. XM_061662112.1 → XP_061518096.1  integrin alpha-PS2 isoform X4

  4. XM_061662106.1 → XP_061518090.1  integrin alpha-PS2 isoform X3

  5. XM_061662090.1 → XP_061518074.1  integrin alpha-PS2 isoform X1

  6. XM_061662117.1 → XP_061518101.1  integrin alpha-PS2 isoform X5

Nucleotide Protein Strain
Heading Accession and Version

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