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LOC1278527 DNA-directed RNA polymerase III subunit RPC1 [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1278527, updated on 4-Jan-2024

Summary

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Gene symbol
LOC1278527
Gene description
DNA-directed RNA polymerase III subunit RPC1
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (65927985..65933102)

Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC3289835 Neighboring gene mucin-5AC-like Neighboring gene uncharacterized LOC4576594 Neighboring gene CXXC-type zinc finger protein 1 Neighboring gene uncharacterized LOC133392274 Neighboring gene sodium channel protein para Neighboring gene uncharacterized LOC133392157

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase III subunit RPC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    65927985..65933102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061652582.1 → XP_061508566.1  DNA-directed RNA polymerase III subunit RPC1 isoform X1

  2. XM_318130.5 → XP_318130.4  DNA-directed RNA polymerase III subunit RPC1 isoform X2

    See identical proteins and their annotated locations for XP_318130.4

    UniProtKB/TrEMBL
    Q7PMU6
    Conserved Domains (4) summary
    cd02736
    Location:1017 → 1357
    RNAP_III_Rpc1_C; Largest subunit (Rpc1) of Eukaryotic RNA polymerase III (RNAP III), C-terminal domain
    PRK08566
    Location:7 → 932
    PRK08566; DNA-directed RNA polymerase subunit A'; Validated
    cd02583
    Location:24 → 893
    RNAP_III_RPC1_N; Largest subunit (RPC1) of eukaryotic RNA polymerase III (RNAP III), N-terminal domain
    pfam04998
    Location:843 → 1308
    RNA_pol_Rpb1_5; RNA polymerase Rpb1, domain 5
Nucleotide Protein Strain
Heading Accession and Version

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