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LOC1280879 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1280879, updated on 4-Jan-2024

Summary

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Gene symbol
LOC1280879
Gene description
DNA-directed RNA polymerases I, II, and III subunit RPABC5
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 3 NC_064602.1 (90353082..90353676, complement)

Chromosome 3 - NC_064602.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein DDB_G0284459 Neighboring gene zinc finger protein 57 Neighboring gene zinc finger protein 227 Neighboring gene uncharacterized LOC1280880 Neighboring gene BAG domain-containing protein Samui Neighboring gene zinc finger protein 236-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064602.1 Chromosome 3 Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA transcription by RNA polymerase III IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription by RNA polymerase I IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerases I, II, and III subunit RPABC5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064602.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    90353082..90353676 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_320749.4 → XP_320749.2  DNA-directed RNA polymerases I, II, and III subunit RPABC5

    See identical proteins and their annotated locations for XP_320749.2

    UniProtKB/TrEMBL
    Q7PZ71
    Conserved Domains (1) summary
    pfam01194
    Location:1 → 59
    RNA_pol_N; RNA polymerases N / 8 kDa subunit
Nucleotide Protein Strain
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