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Cox17 cytochrome c oxidase assembly protein 17, copper chaperone [ Mus musculus (house mouse) ]

Gene ID: 12856, updated on 5-Mar-2024

Summary

Official Symbol
Cox17provided by MGI
Official Full Name
cytochrome c oxidase assembly protein 17, copper chaperoneprovided by MGI
Primary source
MGI:MGI:1333806
See related
Ensembl:ENSMUSG00000046516 AllianceGenome:MGI:1333806
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Enables copper ion binding activity and enzyme activator activity. Predicted to be involved in mitochondrial cytochrome c oxidase assembly; positive regulation of cell population proliferation; and positive regulation of cytochrome-c oxidase activity. Located in mitochondrion. Is expressed in brain; heart; metanephros; and skeletal muscle. Orthologous to human COX17 (cytochrome c oxidase copper chaperone COX17). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in liver E14 (RPKM 48.4), placenta adult (RPKM 37.3) and 28 other tissues See more
Orthologs
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Genomic context

Location:
16 B3; 16 26.77 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (38167332..38173125)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (38346983..38352763)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 1, group I, member 2 Neighboring gene cilia and flagella associated protein 91 Neighboring gene STARR-positive B cell enhancer ABC_E9163 Neighboring gene popeye domain containing 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr16:38400095-38400248 Neighboring gene phospholipase A1 member A Neighboring gene STARR-positive B cell enhancer ABC_E8634

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (1) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables copper chaperone activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables copper chaperone activity ISO
Inferred from Sequence Orthology
more info
 
enables copper ion binding IDA
Inferred from Direct Assay
more info
PubMed 
enables cuprous ion binding ISO
Inferred from Sequence Orthology
more info
 
enables enzyme activator activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables ion binding ISO
Inferred from Sequence Orthology
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in mitochondrial intermembrane space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrial intermembrane space ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion HDA PubMed 

General protein information

Preferred Names
cytochrome c oxidase copper chaperone
Names
cytochrome c oxidase, subunit XVII assembly protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017429.2NP_001017429.1  cytochrome c oxidase copper chaperone

    See identical proteins and their annotated locations for NP_001017429.1

    Status: VALIDATED

    Source sequence(s)
    BC048668, BG792513
    Consensus CDS
    CCDS28165.1
    UniProtKB/Swiss-Prot
    P56394
    UniProtKB/TrEMBL
    Q3UJM3, Q54AC6
    Related
    ENSMUSP00000054086.9, ENSMUST00000050273.9
    Conserved Domains (1) summary
    pfam05051
    Location:1863
    COX17; Cytochrome C oxidase copper chaperone (COX17)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    38167332..38173125
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006521750.5XP_006521813.1  cytochrome c oxidase copper chaperone isoform X1

    See identical proteins and their annotated locations for XP_006521813.1

    UniProtKB/Swiss-Prot
    P56394
    UniProtKB/TrEMBL
    Q3UJM3, Q54AC6
    Related
    ENSMUSP00000113430.2, ENSMUST00000120495.2
    Conserved Domains (1) summary
    pfam05051
    Location:1863
    COX17; Cytochrome C oxidase copper chaperone (COX17)