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Cyct cytochrome c, testis [ Mus musculus (house mouse) ]

Gene ID: 13067, updated on 23-Jun-2021

Summary

Official Symbol
Cyctprovided by MGI
Official Full Name
cytochrome c, testisprovided by MGI
Primary source
MGI:MGI:88579
See related
Ensembl:ENSMUSG00000056436
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
T-Cc
Expression
Restricted expression toward testis adult (RPKM 15.3) See more
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Genomic context

See Cyct in Genome Data Viewer
Location:
2 C3; 2 44.94 cM
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (76184286..76190797, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (76353942..76360453, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (76192000..76198505, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 30A1 Neighboring gene phosphodiesterase 11A Neighboring gene predicted gene, 52518 Neighboring gene RNA binding motif protein 45 Neighboring gene oxysterol binding protein-like 6

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

General protein information

Preferred Names
cytochrome c, testis-specific

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009989.3NP_034119.1  cytochrome c, testis-specific

    See identical proteins and their annotated locations for NP_034119.1

    Status: VALIDATED

    Source sequence(s)
    AL845373, BC049608
    Consensus CDS
    CCDS16156.1
    UniProtKB/Swiss-Prot
    P00015
    Related
    ENSMUSP00000028430.5, ENSMUST00000028430.6
    Conserved Domains (1) summary
    COG3474
    Location:1105
    Cyc7; Cytochrome c2 [Energy production and conversion]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    76184286..76190797 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011239273.1XP_011237575.1  cytochrome c, testis-specific isoform X1

    See identical proteins and their annotated locations for XP_011237575.1

    UniProtKB/Swiss-Prot
    P00015
    Conserved Domains (1) summary
    COG3474
    Location:1105
    Cyc7; Cytochrome c2 [Energy production and conversion]
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