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Cyp2a5 cytochrome P450, family 2, subfamily a, polypeptide 5 [ Mus musculus (house mouse) ]

Gene ID: 13087, updated on 27-Feb-2024

Summary

Official Symbol
Cyp2a5provided by MGI
Official Full Name
cytochrome P450, family 2, subfamily a, polypeptide 5provided by MGI
Primary source
MGI:MGI:88597
See related
Ensembl:ENSMUSG00000005547 AllianceGenome:MGI:88597
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Coh; CYPIIA5; Cyp15a2
Summary
Predicted to enable enzyme binding activity; heme binding activity; and monooxygenase activity. Acts upstream of or within cellular response to cadmium ion; heme metabolic process; and response to stilbenoid. Predicted to be located in cytoplasmic microtubule. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Is expressed in alimentary system; liver; nervous system; nose; and respiratory system. Human ortholog(s) of this gene implicated in nicotine dependence and warfarin resistance. Orthologous to human CYP2A13 (cytochrome P450 family 2 subfamily A member 13) and CYP2A6 (cytochrome P450 family 2 subfamily A member 6). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in liver adult (RPKM 240.7), kidney adult (RPKM 42.6) and 1 other tissue See more
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Genomic context

Location:
7 A3; 7 15.54 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (26534764..26542689)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (26835339..26843264)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 51442 Neighboring gene cytochrome P450, family 2, subfamily b, polypeptide 19 Neighboring gene STARR-seq mESC enhancer starr_18339 Neighboring gene predicted gene, 51443 Neighboring gene cytochrome P450, family 2, subfamily g, polypeptide 1 Neighboring gene Cyp2a5 5' regulatory region Neighboring gene predicted gene, 57503 Neighboring gene apoptosis inhibitor 5, pseudogene Neighboring gene cytochrome P450, family 2, subfamily a, polypeptide 22

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables arachidonic acid epoxygenase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables coumarin 7-hydroxylase activity ISO
Inferred from Sequence Orthology
more info
 
enables enzyme binding ISO
Inferred from Sequence Orthology
more info
 
enables heme binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables heme binding ISO
Inferred from Sequence Orthology
more info
 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to cadmium ion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in coumarin metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in epoxygenase P450 pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within heme metabolic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to stilbenoid IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in xenobiotic metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasmic microtubule ISO
Inferred from Sequence Orthology
more info
 
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
cytochrome P450 2A5
Names
coumarin 7-hydroxylase
cytochrome P450, 2a5
cytochrome P450-15-COH
cytochrome P450-IIA3.2
NP_031838.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_007812.4NP_031838.2  cytochrome P450 2A5

    See identical proteins and their annotated locations for NP_031838.2

    Status: VALIDATED

    Source sequence(s)
    AK132617, AK149439, BC046605
    Consensus CDS
    CCDS21008.1
    UniProtKB/Swiss-Prot
    P20852
    UniProtKB/TrEMBL
    Q80XK1, Q91X75
    Related
    ENSMUSP00000005685.9, ENSMUST00000005685.15
    Conserved Domains (1) summary
    pfam00067
    Location:34491
    p450; Cytochrome P450

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    26534764..26542689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)