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Dio2 deiodinase, iodothyronine, type II [ Mus musculus (house mouse) ]

Gene ID: 13371, updated on 21-Apr-2024

Summary

Official Symbol
Dio2provided by MGI
Official Full Name
deiodinase, iodothyronine, type IIprovided by MGI
Primary source
MGI:MGI:1338833
See related
Ensembl:ENSMUSG00000007682 AllianceGenome:MGI:1338833
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
5DII; DIOII
Summary
The protein encoded by this gene belongs to the iodothyronine deiodinase family. It catalyzes the conversion of prohormone thyroxine (3,5,3',5'-tetraiodothyronine, T4) to the bioactive thyroid hormone (3,5,3'-triiodothyronine, T3) by outer ring 5'-deiodination. This gene is highly expressed in brain, placenta and mammary gland. It is thought to be responsible for the 'local' production of T3, and thus important in influencing thyroid hormone action in these tissues. Knockout studies in mice suggest that this gene may play an important role in brown adipose tissue lipogenesis, auditory function, and bone formation. This protein is a selenoprotein containing the non-standard amino acid, selenocysteine (Sec), which is encoded by the UGA codon that normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon, rather than as a stop signal. Unlike the other two members (DIO1 and DIO3) of this enzyme family, the mRNA for this gene contains an additional in-frame UGA codon that has been reported (in human) to function either as a Sec or a stop codon, resulting in two potential isoforms with one or two Sec residues; however, only the upstream Sec (conserved with the single Sec residue found at the active site in DIO1 and DIO3) was shown to be essential for enzyme activity (PMID:10403186). In addition, the lack of conservation of the protein extension past the second TGA codon suggests that the one-Sec containing isoform represents the canonical form. [provided by RefSeq, Oct 2018]
Expression
Biased expression in subcutaneous fat pad adult (RPKM 14.7), frontal lobe adult (RPKM 8.9) and 4 other tissues See more
Orthologs
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Genomic context

Location:
12 D3; 12 44.05 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (90691326..90705812, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (90724552..90739038, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 40538 Neighboring gene STARR-seq mESC enhancer starr_32922 Neighboring gene LSM14 homolog A pseudogene Neighboring gene STARR-seq mESC enhancer starr_32923 Neighboring gene predicted gene, 26512 Neighboring gene STARR-seq mESC enhancer starr_32924 Neighboring gene nuclear encoded rRNA 5S 65 Neighboring gene predicted gene, 23195

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
enables thyroxine 5'-deiodinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables thyroxine 5'-deiodinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables thyroxine 5'-deiodinase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables thyroxine 5'-deiodinase activity ISO
Inferred from Sequence Orthology
more info
 
enables thyroxine 5-deiodinase activity ISO
Inferred from Sequence Orthology
more info
 
enables ubiquitin protein ligase binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
type II iodothyronine deiodinase
Names
iodothyronine type II deiodinase
type 2 DI
type-II 5' deiodinase
NP_034180.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010050.4NP_034180.2  type II iodothyronine deiodinase

    Status: REVIEWED

    Source sequence(s)
    AK032038, AK045607, BQ033571, CT573100
    Consensus CDS
    CCDS36514.1
    UniProtKB/TrEMBL
    A0A8Z1S5Q0
    Related
    ENSMUSP00000081013.6, ENSMUST00000082432.7
    Conserved Domains (1) summary
    cl00388
    Location:4259
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    90691326..90705812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)