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Enam enamelin [ Mus musculus (house mouse) ]

Gene ID: 13801, updated on 23-Jun-2021

Summary

Official Symbol
Enamprovided by MGI
Official Full Name
enamelinprovided by MGI
Primary source
MGI:MGI:1333772
See related
Ensembl:ENSMUSG00000029286
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
abt; abte
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Enam in Genome Data Viewer
Location:
5; 5 E1
Exon count:
11
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (88635834..88653908)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (88487975..88506049)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (88917000..88935074)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene chromobox protein homolog 3 pseudogene Neighboring gene ameloblastin Neighboring gene immunoglobulin joining chain Neighboring gene UTP3 small subunit processome component

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables structural constituent of tooth enamel IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables structural constituent of tooth enamel IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in extracellular matrix IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_017468.3NP_059496.1  enamelin precursor

    See identical proteins and their annotated locations for NP_059496.1

    Status: VALIDATED

    Source sequence(s)
    AC121585, BB093794, BC115848, CJ046275
    Consensus CDS
    CCDS19400.1
    UniProtKB/Swiss-Prot
    O55196
    UniProtKB/TrEMBL
    Q548P8
    Related
    ENSMUSP00000031222.9, ENSMUST00000031222.9
    Conserved Domains (1) summary
    pfam15362
    Location:2161249
    Enamelin; Enamelin

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    88635834..88653908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030254122.1XP_030109982.1  enamelin isoform X1

    Conserved Domains (1) summary
    pfam15362
    Location:2151111
    Enamelin
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