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dinB DNA polymerase IV [ Methanoregula formicica SMSP ]

Gene ID: 14309970, updated on 8-Dec-2022

Summary

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Gene symbol
dinB
Gene description
DNA polymerase IV
Locus tag
METFOR_RS12575
Gene type
protein coding
Organism
Methanoregula formicica SMSP (strain: SMSP, type-material: type strain of Methanoregula formicica)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula
Old locus tag
Metfor_2578
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Genomic context

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Sequence:
NC_019943.1 (2522546..2523703, complement)

NC_019943.1Genomic Context describing neighboring genes Neighboring gene deaminase Neighboring gene DUF1294 domain-containing protein Neighboring gene DUF6125 family protein Neighboring gene hypothetical protein Neighboring gene Nre family DNA repair protein Neighboring gene YkgJ family cysteine cluster protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_019943.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis. Vaisman A, et al. EMBO J, 2005 Sep 7. PMID 16107880, Free PMC Article
  2. Stepwise translocation of Dpo4 polymerase during error-free bypass of an oxoG lesion. Rechkoblit O, et al. PLoS Biol, 2006 Jan. PMID 16379496, Free PMC Article
  3. Mutator phenotype resulting from DNA polymerase IV overproduction in Escherichia coli: preferential mutagenesis on the lagging strand. Kuban W, et al. J Bacteriol, 2005 Oct. PMID 16166552, Free PMC Article
  4. Nucleotide excision repair or polymerase V-mediated lesion bypass can act to restore UV-arrested replication forks in Escherichia coli. Courcelle CT, et al. J Bacteriol, 2005 Oct. PMID 16199565, Free PMC Article
  5. The biochemical requirements of DNA polymerase V-mediated translesion synthesis revisited. Fujii S, et al. J Mol Biol, 2004 Aug 6. PMID 15276832

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
DNA polymerase IV
WP_015286532.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_019943.1 Reference assembly

    Range
    2522546..2523703 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_015286532.1 DNA polymerase IV [Methanoregula formicica]

    See identical proteins and their annotated locations for WP_015286532.1

    UniProtKB/TrEMBL
    L0HHR3
    Conserved Domains (2) summary
    cd03586
    Location:34 → 371
    PolY_Pol_IV_kappa; DNA Polymerase IV/Kappa
    PRK02406
    Location:38 → 383
    PRK02406; DNA polymerase IV; Validated
Nucleotide Protein
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