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vat VCP-like ATPase [ Thermoplasma acidophilum DSM 1728 ]

Gene ID: 1456383, discontinued on 14-Dec-2023
  • This record was discontinued.

Summary

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Gene symbol
vat
Gene description
VCP-like ATPase
Locus tag
TA_RS04345
Gene type
protein coding
Organism
Thermoplasma acidophilum DSM 1728 (strain: DSM 1728, type-material: type strain of Thermoplasma acidophilum)
Lineage
Archaea; Candidatus Thermoplasmatota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma
Old locus tag
Ta0840
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002578.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. VAT, the thermoplasma homolog of mammalian p97/VCP, is an N domain-regulated protein unfoldase. Gerega A, et al. J Biol Chem, 2005 Dec 30. PMID 16236712
  2. Structure of VAT, a CDC48/p97 ATPase homologue from the archaeon Thermoplasma acidophilum as studied by electron tomography. Rockel B, et al. FEBS Lett, 1999 May 14. PMID 10356978
  3. Cloning, sequencing and expression of VAT, a CDC48/p97 ATPase homologue from the archaeon Thermoplasma acidophilum. Pamnani V, et al. FEBS Lett, 1997 Mar 10. PMID 9119075
  4. The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum. Ruepp A, et al. Nature, 2000 Sep 28. PMID 11029001

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. VAT is an N domain-regulated protein unfoldase
    Title: VAT, the thermoplasma homolog of mammalian p97/VCP, is an N domain-regulated protein unfoldase.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
VCP-like ATPase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002578.1 Reference assembly

    Range
    906394..908631 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010901251.1 VCP-like ATPase [Thermoplasma acidophilum]

    See identical proteins and their annotated locations for WP_010901251.1

    Conserved Domains (4) summary
    smart01072
    Location:112 → 179
    CDC48_2; Cell division protein 48 (CDC48) domain 2
    TIGR01243
    Location:9 → 729
    CDC48; AAA family ATPase, CDC48 subfamily
    pfam00004
    Location:227 → 357
    AAA; ATPase family associated with various cellular activities (AAA)
    pfam02359
    Location:8 → 91
    CDC48_N; Cell division protein 48 (CDC48), N-terminal domain
Protein Accession Links
GenPept Link UniProtKB Link
O05209.1

Gene LinkOut

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Molecular Biology Databases
Research Materials