U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ORF61 ubiquitin E3 ligase ICP0 [ Human alphaherpesvirus 3 (Varicella-zoster virus) ]

Gene ID: 1487698, updated on 2-Aug-2022

Summary

Gene symbol
ORF61
Gene description
ubiquitin E3 ligase ICP0
Locus tag
HHV3_gp62
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Human alphaherpesvirus 3 (strain: Dumas, acronym: HHV-3, acronym: VZV, nat-host: Homo sapiens)
Lineage
Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Sequence:
NC_001348.1 (103001..104485, complement)

NC_001348.1Genomic Context describing neighboring genes Neighboring gene helicase-primase helicase subunit Neighboring gene nuclear protein UL4 Neighboring gene protein V57 Neighboring gene nuclear protein UL3 Neighboring gene uracil-DNA glycosylase Neighboring gene envelope glycoprotein L Neighboring gene transcriptional regulator ICP4 Neighboring gene regulatory protein ICP22

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

regulatory

  • Loc: c103006-103001 regulatory_class = polyA_signal_sequence

General protein information

Preferred Names
ubiquitin E3 ligase ICP0
NP_040183.1

VOG classification

Description:

  • VOGd0141 [T] * Ring finger domain viral protein, (putative) E3 ubiquitin ligase, some members are transcriptional regulators.
  • RNA Replication, Transcription and Modification

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001348.1 Reference assembly

    Range
    103001..104485 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_040183.1 ubiquitin E3 ligase ICP0 [Human alphaherpesvirus 3]

    See identical proteins and their annotated locations for NP_040183.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P09309
    UniProtKB/TrEMBL
    Q6QCJ5, Q71S71, Q77NN8
    Conserved Domains (3) summary
    COG5243
    Location:15172
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
    cd00162
    Location:1957
    RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
    pfam00097
    Location:1957
    zf-C3HC4; Zinc finger, C3HC4 type (RING finger)